Miyakogusa Predicted Gene
- Lj0g3v0199279.3
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7L0E0_SOYBN |
174 |
64.4 |
71.8 |
(tr|K7L0E0) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G61130.1 |
94.7 |
42.5 |
57.5 |
| Symbols: GAUT1, LGT1 | galacturonosyltransferase 1 | chr3:22622399-22625514 FORWARD LENGTH=673 |
| Medicago |
Medtr8g033360.1 |
158 |
62.6 |
71.8 |
| CAZy family GT8 glycosyltransferase | HC | chr8:12859850-12864370 | 20130731 |
| Soybean |
Glyma09g40260.1 |
118 |
54.3 |
64.6 |
|
| LJGI |
gnl|LJGI|TC59506 |
870 |
98.1 |
98.1 |
similar to UniRef100_Q9M3Y6 Cluster: 68 kDa protein; n=1; Cicer arietinum|Rep: 68 kDa protein - Cicer arietinum (Chickpea) (Garbanzo), partial (22%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0199279.3 |
length: 157 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR32116 |
FAMILY |
1.1e-17 |
1-157 |
| HMMPanther |
PTHR32116:SF4 |
SUBFAMILY |
1.1e-17 |
1-157 |
| Seg |
seg |
seg |
NA |
137-152 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
8 |
30 |
- Wolf-PSORT
Lj0g3v0199279.3 vacu 6, chlo 3, nucl 1, mito 1, extr 1, E.R. 1, golg 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0199279.3 |
|