Miyakogusa Predicted Gene

Lj0g3v0198799.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL --No_Hits--

TAIR_pep AT3G23990.1 50.4 72.4 93.1 | Symbols: HSP60, HSP60-3B | heat shock protein 60 | chr3:8669013-8672278 FORWARD LENGTH=577

Medicago Medtr1g090130.1 52.0 72.4 93.1 | TCP-1/cpn60 chaperonin family protein | HC | chr1:40370583-40364703 | 20130731

Soybean Glyma20g33910.1 52.0 72.4 93.1

LJGI gnl|LJGI|TC57661 67.9 95.2 95.2 similar to UniRef100_A8TWZ3 Cluster: CBL8; n=1; Gossypium hirsutum|Rep: CBL8 - Gossypium hirsutum (Upland cotton) (Gossypium mexicanum), partial (20%)

Putative transmembrane regions

From To

TM segments
SOSUI 12 34

Wolf-PSORT

Lj0g3v0198799.1 chlo 5, E.R. 4, cyto 2, E.R._plas 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0198799.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	--No_Hits--
TAIR_pep	AT3G23990.1	50.4	72.4	93.1	\| Symbols: HSP60, HSP60-3B \| heat shock protein 60 \| chr3:8669013-8672278 FORWARD LENGTH=577
Medicago	Medtr1g090130.1	52.0	72.4	93.1	\| TCP-1/cpn60 chaperonin family protein \| HC \| chr1:40370583-40364703 \| 20130731
Soybean	Glyma20g33910.1	52.0	72.4	93.1
LJGI	gnl\|LJGI\|TC57661	67.9	95.2	95.2	similar to UniRef100_A8TWZ3 Cluster: CBL8; n=1; Gossypium hirsutum\|Rep: CBL8 - Gossypium hirsutum (Upland cotton) (Gossypium mexicanum), partial (20%)