Miyakogusa Predicted Gene

Lj0g3v0198769.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1MPU8_SOYBN 1511 68.4 77.8 (tr|I1MPU8) Uncharacterized protein OS=Glycine max PE=4 SV=2

TAIR_pep AT5G52290.1 544 34.8 51.5 | Symbols: SHOC1 | shortage in chiasmata 1 | chr5:21230353-21236554 REVERSE LENGTH=1594

Medicago Medtr6g045357.1 1461 67.1 77.1 | shortage in chiasmata protein, putative | HC | chr6:16283994-16291769 | 20130731

Soybean Glyma16g31320.1 1513 68.4 77.8

LJGI gnl|LJGI|AV409010 751 96.0 96.0 UniRef100_Q9FHD0 Cluster: Genomic DNA chromosome 5 TAC clone:K24M7; n=1; Arabidopsis thaliana|Rep: Genomic DNA, partial (0%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0198769.1 length: 1173 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 319-335
746-758
1032-1047

Wolf-PSORT

Lj0g3v0198769.1 nucl 11, cyto 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0198769.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1MPU8_SOYBN	1511	68.4	77.8	(tr\|I1MPU8) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep	AT5G52290.1	544	34.8	51.5	\| Symbols: SHOC1 \| shortage in chiasmata 1 \| chr5:21230353-21236554 REVERSE LENGTH=1594
Medicago	Medtr6g045357.1	1461	67.1	77.1	\| shortage in chiasmata protein, putative \| HC \| chr6:16283994-16291769 \| 20130731
Soybean	Glyma16g31320.1	1513	68.4	77.8
LJGI	gnl\|LJGI\|AV409010	751	96.0	96.0	UniRef100_Q9FHD0 Cluster: Genomic DNA chromosome 5 TAC clone:K24M7; n=1; Arabidopsis thaliana\|Rep: Genomic DNA, partial (0%)

no_ID
Lj0g3v0198769.1				length: 1173 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	319-335 746-758 1032-1047