Miyakogusa Predicted Gene

Lj0g3v0198019.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3SJH1_LOTJA 200 58.1 68.6 (tr|I3SJH1) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT3G06240.1 52.8 30.2 49.2 | Symbols: | F-box family protein | chr3:1887336-1888619 FORWARD LENGTH=427

Medicago Medtr3g103020.1 151 47.2 61.0 | galactose oxidase | HC | chr3:47452814-47451137 | 20130731

Soybean Glyma08g10360.1 120 40.7 58.7

LJGI gnl|LJGI|TC79595 161 95.0 95.0

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0198019.1 length: 189 aa.

IPR006527 F-box associated domain, type 1

method AccNumber shortName E-value location

HMMPfam PF07734 FBA_1 6.4e-07 34-125

IPR017451 F-box associated interaction domain

HMMTigr TIGR01640 F_box_assoc_1: 1.3e-10 20-153

Wolf-PSORT

Lj0g3v0198019.1 mito 8, chlo 5

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0198019.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3SJH1_LOTJA	200	58.1	68.6	(tr\|I3SJH1) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT3G06240.1	52.8	30.2	49.2	\| Symbols: \| F-box family protein \| chr3:1887336-1888619 FORWARD LENGTH=427
Medicago	Medtr3g103020.1	151	47.2	61.0	\| galactose oxidase \| HC \| chr3:47452814-47451137 \| 20130731
Soybean	Glyma08g10360.1	120	40.7	58.7
LJGI	gnl\|LJGI\|TC79595	161	95.0	95.0

IPR006527	F-box associated domain, type 1
Lj0g3v0198019.1				length: 189 aa.
method	AccNumber	shortName	E-value	location
HMMPfam	PF07734	FBA_1	6.4e-07	34-125
IPR017451	F-box associated interaction domain
HMMTigr	TIGR01640	F_box_assoc_1:	1.3e-10	20-153