Miyakogusa Predicted Gene

Lj0g3v0197339.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q8GZD1_LOTJA 624 91.5 91.5 (tr|Q8GZD1) Chloroplast biogenesis protein OS=Lotus japonicus GN=CCDA PE=2 SV=1
TAIR_pep AT5G54290.2 390 65.2 73.2 | Symbols: CcdA | cytochrome c biogenesis protein family | chr5:22051097-22053923 FORWARD LENGTH=355
Medicago Medtr8g464410.1 489 77.0 82.5 | C-type cytochrome biogenesis protein | HC | chr8:22761973-22757927 | 20130731
Soybean Glyma12g22350.1 534 78.3 85.0  
LJGI gnl|LJGI|TC60231 2030 99.8 99.8 UniRef100_Q8GZD1 Cluster: Chloroplast biogenesis protein; n=1; Lotus japonicus|Rep: Chloroplast biogenesis protein - Lotus japonicus, complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0197339.1 length: 343 aa.
IPR003834 Cytochrome c assembly protein, transmembrane domain
method AccNumber shortName E-value location
Cellular Component GO:0016020 membrane    
Biological Process GO:0017004 cytochrome complex assembly    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF02683 DsbD 2.5e-41 125-332
no_ID  
HMMPanther PTHR31272 FAMILY 3e-132 80-338
Seg seg seg NA 71-81
167-184
Putative transmembrane regions
  From To
TM segments
SOSUI		 122 144
163 185
198 220
232 254
260 282
287 308
311 333
Wolf-PSORT
Lj0g3v0197339.1	chlo 9, mito 2, nucl 1, plas 1, E.R. 1, cyto_mito 1, nucl_plas 1, E.R._plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0197339.1