Miyakogusa Predicted Gene

Lj0g3v0197289.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KHG4_MEDTR 169 70.2 87.5 (tr|G7KHG4) 22.7 kDa class IV heat shock protein OS=Medicago truncatula GN=MTR_5g087450 PE=3 SV=1
TAIR_pep AT2G27140.1 109 51.1 70.2 | Symbols: | HSP20-like chaperones superfamily protein | chr2:11598496-11599264 REVERSE LENGTH=224
Medicago Medtr5g087450.1 168 70.2 87.5 | hsp20/alpha crystallin family protein | HC | chr5:37892934-37894362 | 20130731
Soybean Glyma10g15950.1 132 62.4 78.5  
LJGI gnl|LJGI|GO023773 1102 99.5 99.5 UniRef100_Q177B1 Cluster: Hemomucin; n=1; Aedes aegypti|Rep: Hemomucin - Aedes aegypti (Yellowfever mosquito), partial (3%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0197289.1 length: 338 aa.
IPR002068 Alpha crystallin/Hsp20 domain
method AccNumber shortName E-value location
HMMPfam PF00011 HSP20 3.1e-10 31-106
ProfileScan PS01031 HSP20 12.452 22-100
IPR008978 HSP20-like chaperone
superfamily SSF49764 HSP20-like 1.4e-15 9-100
no_ID  
Coil coil coiled-coil NA 287-315
Gene3D G3DSA:2.60.40.790 no description 2.3e-14 9-103
HMMPanther PTHR11527 SMALL 5e-21 1-100
HMMPanther PTHR11527:SF61 SUBFAMILY 5e-21 1-100
Seg seg seg NA 106-161
233-250
317-328
Putative transmembrane regions
  From To
TM segments
SOSUI		 314 336
Wolf-PSORT
Lj0g3v0197289.1	nucl 4, cyto 3.5, cyto_pero 2.5, mito 2, golg 2, cysk_nucl 2, nucl_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0197289.1