Miyakogusa Predicted Gene

Lj0g3v0196359.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL G7JAT8_MEDTR 79.0 44.1 52.3 (tr|G7JAT8) Receptor-like kinase OS=Medicago truncatula GN=MTR_3g084510 PE=3 SV=1
TAIR_pep AT3G23750.1 49.7 50.0 56.5 | Symbols: | Leucine-rich repeat protein kinase family protein | chr3:8558332-8561263 FORWARD LENGTH=928
Medicago Medtr3g084510.1 79.0 44.1 52.3 | LRR receptor-like kinase | HC | chr3:38162418-38158211 | 20130731
Soybean Glyma18g00610.2 63.5 40.6 53.1  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0196359.1 length: 256 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.035 107-128
136-153
157-176
ProfileScan PS51450 LRR 5.125 107-129
157-179
133-156
IPR013210 Leucine-rich repeat-containing N-terminal, type 2
HMMPfam PF08263 LRRNT_2 5.6e-05 51-78
no_ID  
FPrintScan PR00019 LEURICHRPT 5.5e-05 134-147
155-168
Gene3D G3DSA:3.80.10.10 no description 2e-23 59-201
HMMPanther PTHR24420 FAMILY 1.3e-19 81-175
Seg seg seg NA 88-117
150-164
superfamily SSF52058 L 1.6e-21 39-174
Putative transmembrane regions
  From To
TM segments
SOSUI
21 43
205 227
234 255
Wolf-PSORT
Lj0g3v0196359.1	plas 5, extr 3, vacu 3, golg 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0196359.1