Miyakogusa Predicted Gene

Lj0g3v0195949.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL M9TGR5_PERCU 79.0 97.3 100.0 (tr|M9TGR5) Actin-related protein OS=Pericallis cuneata PE=2 SV=1
TAIR_pep AT3G27000.1 76.6 97.3 100.0 | Symbols: ARP2, ATARP2, WRM | actin related protein 2 | chr3:9952787-9955784 REVERSE LENGTH=389
Medicago Medtr7g027185.2 79.0 97.3 100.0 | actin-related protein ARP4 | HC | chr7:9211642-9202611 | 20130731
Soybean Glyma16g05780.1 79.0 97.3 100.0  
LJGI gnl|LJGI|BP074351 299 100.0 100.0 homologue to UniRef100_A7P9Y2 Cluster: Chromosome chr14 scaffold_9, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_9, whole genome shotgun sequence - Vitis vinifera (Grape), partial (15%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0195949.1 length: 49 aa.
IPR004000 Actin-related protein
method AccNumber shortName E-value location
HMMPanther PTHR11937 ACTIN 1.3e-15 11-48
HMMPfam PF00022 Actin 3e-09 8-46
IPR027306 Actin-related protein 2 (Arp2)
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005856 cytoskeleton    
Cellular Component GO:0005885 Arp2/3 protein complex    
Biological Process GO:0030833 regulation of actin filament polymerization    
Biological Process GO:0034314 Arp2/3 complex-mediated actin nucleation    
HMMPanther PTHR11937:SF37 ACTIN-RELATED 1.3e-15 11-48
no_ID  
Gene3D G3DSA:3.90.640.10 no description 1.5e-12 4-46
superfamily SSF53067 Actin-like 1.9e-06 4-47
Wolf-PSORT
Lj0g3v0195949.1	cyto 6, chlo 3, cyto_pero 3, cyto_E.R. 3, cyto_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0195949.1