Miyakogusa Predicted Gene
- Lj0g3v0194619.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7K2G5_MEDTR |
389 |
92.6 |
96.6 |
(tr|G7K2G5) Adiponectin receptor protein OS=Medicago truncatula GN=MTR_5g015270 PE=4 SV=1 |
| TAIR_pep |
AT4G37680.2 |
373 |
88.1 |
92.5 |
| Symbols: HHP4 | heptahelical protein 4 | chr4:17701231-17702568 FORWARD LENGTH=385 |
| Medicago |
Medtr5g015270.3 |
389 |
92.6 |
96.6 |
| heptahelical protein | HC | chr5:5271586-5267855 | 20130731 |
| Soybean |
Glyma11g05030.1 |
386 |
90.6 |
95.6 |
|
| LJGI |
gnl|LJGI|TC62851 |
1215 |
100.0 |
100.0 |
similar to UniRef100_A7R5Z4 Cluster: Chromosome undetermined scaffold_1102, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_1102, whole genome shotgun sequence - Vitis vinifera (Grape), partial (87%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0194619.1 |
length: 203 aa. |
| IPR004254 |
Hly-III-related |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0016021 |
integral to membrane |
|
|
| HMMPanther |
PTHR20855 |
ADIPOR/PROGESTIN |
3.7e-133 |
3-203 |
| HMMPfam |
PF03006 |
HlyIII |
8.1e-71 |
4-188 |
| no_ID |
|
| HMMPanther |
PTHR20855:SF14 |
ADIPONECTIN |
3.7e-133 |
3-203 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
9 |
31 |
| 41 |
63 |
| 71 |
93 |
| 136 |
158 |
- Wolf-PSORT
Lj0g3v0194619.1 plas 4, chlo 2, mito 2, extr 2, E.R. 2, golg 2, chlo_mito 2, nucl_plas 2, cysk_plas 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0194619.1 |
|