Miyakogusa Predicted Gene
- Lj0g3v0194229.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1M634_SOYBN |
149 |
73.7 |
83.8 |
(tr|I1M634) Glutamate receptor OS=Glycine max PE=3 SV=2 |
| TAIR_pep |
AT4G35290.1 |
102 |
51.9 |
67.0 |
| Symbols: GLUR2, GLR3.2, ATGLR3.2, ATGLUR2 | glutamate receptor 2 | chr4:16790290-16793461 FORWARD LENGTH=912 |
| Medicago |
Medtr8g073210.2 |
95.5 |
48.0 |
69.0 |
| glutamate receptor 3.2 | HC | chr8:30988646-30984347 | 20130731 |
| Soybean |
Glyma14g00350.1 |
149 |
73.7 |
83.8 |
|
| LJGI |
gnl|LJGI|TC75875 |
525 |
99.6 |
99.6 |
similar to UniRef100_Q93YT1 Cluster: Glutamate receptor 3.2 precursor; n=1; Arabidopsis thaliana|Rep: Glutamate receptor 3.2 precursor - Arabidopsis thaliana (Mouse-ear cress), partial (16%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0194229.1 |
length: 90 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR18966 |
IONOTROPIC |
4.2e-30 |
1-81 |
| HMMPanther |
PTHR18966:SF7 |
GLUTAMATE |
4.2e-30 |
1-81 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
43 |
65 |
- Wolf-PSORT
Lj0g3v0194229.1 nucl 3, E.R. 3, mito 2, extr 2, cyto_nucl 2, nucl_plas 2, E.R._vacu 2, E.R._plas 2, cyto_E.R. 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0194229.1 |
|