Miyakogusa Predicted Gene
- Lj0g3v0192569.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7MJA4_SOYBN |
597 |
69.6 |
79.0 |
(tr|K7MJA4) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G47690.3 |
568 |
50.0 |
64.2 |
| Symbols: | binding | chr5:19317899-19327014 FORWARD LENGTH=1607 |
| Medicago |
Medtr4g134080.3 |
719 |
60.4 |
68.6 |
| sister chromatid cohesion PDS5-like protein | HC | chr4:56119254-56132113 | 20130731 |
| Soybean |
Glyma07g39830.1 |
590 |
69.6 |
78.3 |
|
| LJGI |
gnl|LJGI|BP053710 |
890 |
99.6 |
99.6 |
similar to UniRef100_A2Q1R4 Cluster: HEAT; n=1; Medicago truncatula|Rep: HEAT - Medicago truncatula (Barrel medic), partial (9%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0192569.1 |
length: 573 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Coil |
coil |
coiled-coil |
NA |
147-175 |
| HMMPanther |
PTHR12663 |
ANDROGEN |
6.3e-37 |
61-543 |
| HMMPanther |
PTHR12663:SF0 |
SUBFAMILY |
6.3e-37 |
61-543 |
| Seg |
seg |
seg |
NA |
241-259 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
225 |
247 |
- Wolf-PSORT
Lj0g3v0192569.1 nucl 5, cyto 3, vacu 3, plas 2, E.R._vacu 2, cyto_E.R. 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0192569.1 |
|