Miyakogusa Predicted Gene
- Lj0g3v0191909.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0191909.1 |
length: 386 aa. |
| IPR011701 |
Major facilitator superfamily |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0016021 |
integral to membrane |
|
|
| Biological Process |
GO:0055085 |
transmembrane transport |
|
|
| HMMPfam |
PF07690 |
MFS_1 |
8e-35 |
13-351 |
| IPR016196 |
Major facilitator superfamily domain, general substrate transporter |
| superfamily |
SSF103473 |
MFS |
6.5e-40 |
1-354 |
| IPR020846 |
Major facilitator superfamily domain |
| ProfileScan |
PS50850 |
MFS |
19.778 |
7-386 |
| no_ID |
|
| Gene3D |
G3DSA:1.20.1250.20 |
no description |
2.6e-25 |
8-190 |
| HMMPanther |
PTHR24003 |
MAJOR |
6.7e-137 |
1-346 |
| HMMPanther |
PTHR24003:SF115SUBFAMILY |
NOT |
6.7e-137 |
1-346 |
| Seg |
seg |
seg |
NA |
301-322 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
72 |
94 |
| 97 |
119 |
| 154 |
176 |
| 222 |
244 |
| 258 |
280 |
| 296 |
318 |
| 321 |
341 |
| 358 |
380 |
- Wolf-PSORT
Lj0g3v0191909.1 plas 8, vacu 3, golg 2, E.R._vacu 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0191909.1 |
|