Miyakogusa Predicted Gene
- Lj0g3v0191909.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
- A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0191909.1 |
length: 386 aa. |
IPR011701 |
Major facilitator superfamily |
method |
AccNumber |
shortName |
E-value |
location |
Cellular Component |
GO:0016021 |
integral to membrane |
|
|
Biological Process |
GO:0055085 |
transmembrane transport |
|
|
HMMPfam |
PF07690 |
MFS_1 |
8e-35 |
13-351 |
IPR016196 |
Major facilitator superfamily domain, general substrate transporter |
superfamily |
SSF103473 |
MFS |
6.5e-40 |
1-354 |
IPR020846 |
Major facilitator superfamily domain |
ProfileScan |
PS50850 |
MFS |
19.778 |
7-386 |
no_ID |
|
Gene3D |
G3DSA:1.20.1250.20 |
no description |
2.6e-25 |
8-190 |
HMMPanther |
PTHR24003 |
MAJOR |
6.7e-137 |
1-346 |
HMMPanther |
PTHR24003:SF115SUBFAMILY |
NOT |
6.7e-137 |
1-346 |
Seg |
seg |
seg |
NA |
301-322 |
- Putative transmembrane regions
|
From |
To |
TM segments
SOSUI |
72 |
94 |
97 |
119 |
154 |
176 |
222 |
244 |
258 |
280 |
296 |
318 |
321 |
341 |
358 |
380 |
- Wolf-PSORT
Lj0g3v0191909.1 plas 8, vacu 3, golg 2, E.R._vacu 2
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj0g3v0191909.1 |
|