Miyakogusa Predicted Gene
- Lj0g3v0188989.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MKP3_SOYBN |
206 |
54.5 |
61.0 |
(tr|I1MKP3) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G46260.1 |
187 |
48.8 |
56.2 |
| Symbols: | BTB/POZ/Kelch-associated protein | chr2:18996111-18998463 FORWARD LENGTH=561 |
| Medicago |
Medtr8g028190.1 |
197 |
52.1 |
58.1 |
| BTB/POZ domain protein POB1 | HC | chr8:10528673-10524289 | 20130731 |
| Soybean |
Glyma16g03260.1 |
206 |
54.5 |
61.0 |
|
| LJGI |
gnl|LJGI|TC59597 |
1009 |
99.8 |
99.8 |
similar to UniRef100_O82343 Cluster: Expressed protein; n=1; Arabidopsis thaliana|Rep: Expressed protein - Arabidopsis thaliana (Mouse-ear cress), partial (23%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0188989.1 |
length: 172 aa. |
| IPR000210 |
BTB/POZ-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMSmart |
SM00225 |
Broad-Complex, |
2.7e-05 |
58-156 |
| ProfileScan |
PS50097 |
BTB |
13.467 |
48-125 |
| IPR011333 |
BTB/POZ fold |
| Gene3D |
G3DSA:3.30.710.10 |
no description |
3.6e-19 |
64-147 |
| superfamily |
SSF54695 |
POZ |
4.4e-11 |
61-151 |
| IPR013069 |
BTB/POZ |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF00651 |
BTB |
1.5e-14 |
62-145 |
| no_ID |
|
| HMMPanther |
PTHR24412 |
FAMILY |
4.2e-51 |
23-168 |
| HMMPanther |
PTHR24412:SF93 |
SUBFAMILY |
4.2e-51 |
23-168 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
118 |
140 |
| 150 |
171 |
- Wolf-PSORT
Lj0g3v0188989.1 nucl 7, chlo 2, cyto 2, plas 1, extr 1, golg 1, chlo_mito 1, golg_plas 1, cyto_pero 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0188989.1 |
|