Miyakogusa Predicted Gene

Lj0g3v0188699.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MCQ2_SOYBN 1156 81.2 90.9 (tr|K7MCQ2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G42170.1 377 32.9 51.9 | Symbols: | BED zinc finger ;hAT family dimerisation domain | chr3:14321838-14323928 FORWARD LENGTH=696
Medicago Medtr4g036325.1 70.5 29.8 59.7 | hypothetical protein | LC | chr4:13081348-13082899 | 20130731
Soybean Glyma09g15130.2 1149 81.0 90.4  
LJGI gnl|LJGI|TC58577 1316 99.7 99.7 similar to UniRef100_A7P282 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0188699.1 length: 676 aa.
IPR003656 Zinc finger, BED-type predicted
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
HMMPfam PF02892 zf-BED 6.4e-10 17-61
HMMSmart SM00614 BED 4.8e-18 14-64
ProfileScan PS50808 ZF_BED 10.968 14-69
IPR008906 HAT dimerisation
Molecular Function GO:0046983 protein dimerization activity    
HMMPfam PF05699 Dimer_Tnp_hAT 8.6e-30 570-652
IPR012337 Ribonuclease H-like domain
Molecular Function GO:0003676 nucleic acid binding    
superfamily SSF53098 Ribonuclease 2.1e-79 185-657
IPR025525 Domain of unknown function DUF4413
HMMPfam PF14372 DUF4413 4.1e-33 422-523
no_ID  
HMMPanther PTHR10775 UNCHARACTERIZED 7e-126 13-664
HMMPanther PTHR10775:SF11 SUBFAMILY 7e-126 13-664
Seg seg seg NA 660-665
superfamily SSF57667 C2H2 5.1e-08 17-73
Wolf-PSORT
Lj0g3v0188699.1	nucl 8, cyto 4, cysk_nucl 4, nucl_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0188699.1