Miyakogusa Predicted Gene

Lj0g3v0187709.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IAW3_MEDTR 359 41.9 56.5 (tr|G7IAW3) 60S ribosomal protein L7 OS=Medicago truncatula GN=MTR_1g108780 PE=4 SV=1
TAIR_pep AT3G18990.1 118 27.9 43.3 | Symbols: VRN1, REM39 | AP2/B3-like transcriptional factor family protein | chr3:6549077-6551568 REVERSE LENGTH=341
Medicago Medtr1g108780.1 364 44.4 59.3 | transcriptional factor B3 family protein | HC | chr1:49164002-49166141 | 20130731
Soybean Glyma09g18790.1 244 45.8 59.7  
LJGI gnl|LJGI|TC73841 656 98.6 98.6 similar to UniRef100_A7P9A4 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (6%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0187709.1 length: 500 aa.
IPR003340 B3 DNA binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02362 B3 4e-09 11-103
241-323
396-487
HMMSmart SM01019 B3 4.7e-06 11-103
241-330
394-489
ProfileScan PS50863 B3 10.433 10-103
240-330
436-489
IPR015300 DNA-binding pseudobarrel domain
Gene3D G3DSA:2.40.330.10 no description 3.5e-15 10-103
233-323
387-489
superfamily SSF101936 DNA-binding 1.6e-14 5-111
235-336
387-491
no_ID  
Seg seg seg NA 9-20
114-125
Wolf-PSORT
Lj0g3v0187709.1	cyto 5, nucl 4, chlo 2, mito 2, chlo_mito 2, nucl_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0187709.1