Miyakogusa Predicted Gene

Lj0g3v0187619.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1JLB0_SOYBN 535 64.2 73.0 (tr|I1JLB0) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G45616.1 154 33.2 51.5 | Symbols: AtRLP6, RLP6 | receptor like protein 6 | chr1:17183550-17186534 REVERSE LENGTH=994
Medicago Medtr4g017640.1 565 66.7 77.3 | verticillium wilt resistance-like protein | HC | chr4:5537986-5541955 | 20130731
Soybean Glyma03g07240.1 535 71.4 80.5  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0187619.1 length: 441 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.2 356-373
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 1.8e+02 101-124
233-256
353-377
402-426
IPR013210 Leucine-rich repeat-containing N-terminal, type 2
HMMPfam PF08263 LRRNT_2 1.3e-08 32-73
no_ID  
Gene3D G3DSA:3.80.10.10 no description 3.4e-16 29-163
168-360
361-440
HMMPanther PTHR24420 FAMILY 2e-69 82-440
HMMPfam PF13855 LRR_8 2.4e-07 210-270
378-438
Seg seg seg NA 29-57
420-429
superfamily SSF52058 L 1.2e-55 29-441
Putative transmembrane regions
  From To
TM segments
SOSUI
8 29
Wolf-PSORT
Lj0g3v0187619.1	vacu 5, extr 4, chlo 2, nucl 1, plas 1, golg 1, chlo_mito 1, nucl_plas 1, golg_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0187619.1