Miyakogusa Predicted Gene

Lj0g3v0187299.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL M5WQK0_PRUPE 115 41.1 52.8 (tr|M5WQK0) Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa024571mg PE=4 SV=1
TAIR_pep AT3G07930.2 104 35.5 51.9 | Symbols: | DNA glycosylase superfamily protein | chr3:2526720-2528145 FORWARD LENGTH=358
Medicago Medtr6g033105.1 78.6 50.7 61.6 | hypothetical protein | LC | chr6:10427112-10425913 | 20130731
Soybean Glyma13g11620.1 95.9 74.1 85.2  
LJGI gnl|LJGI|TC58046 1405 99.7 99.7 similar to UniRef100_A7R238 Cluster: Chromosome undetermined scaffold_397, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_397, whole genome shotgun sequence - Vitis vinifera (Grape), partial (33%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0187299.1 length: 280 aa.
IPR011257 DNA glycosylase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0006281 DNA repair    
Gene3D G3DSA:1.10.340.30 no description 1.2e-07 199-239
no_ID  
HMMPanther PTHR15074 5-METHYLCYTOSINE 2.7e-12 188-239
Seg seg seg NA 31-41
Putative transmembrane regions
  From To
TM segments
SOSUI		 216 238
244 266
Wolf-PSORT
Lj0g3v0187299.1	nucl 7, chlo 3, cyto 2, plas 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0187299.1