Miyakogusa Predicted Gene

Lj0g3v0186729.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B9SE66_RICCO 671 77.4 85.4 (tr|B9SE66) Phosphoric diester hydrolase, putative OS=Ricinus communis GN=RCOM_0959040 PE=4 SV=1
TAIR_pep AT1G25280.1 542 65.4 74.6 | Symbols: AtTLP10, TLP10 | tubby like protein 10 | chr1:8864961-8866608 FORWARD LENGTH=445
Medicago Medtr1g098790.4 663 77.3 82.6 | tubby-F-box-like protein | HC | chr1:44500766-44497608 | 20130731
Soybean Glyma20g30660.2 671 77.7 83.3  
LJGI gnl|LJGI|TC61452 1162 99.3 99.3 similar to UniRef100_Q9FRH7 Cluster: Tubby-like F-box protein 10; n=1; Arabidopsis thaliana|Rep: Tubby-like F-box protein 10 - Arabidopsis thaliana (Mouse-ear cress), partial (81%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0186729.1 length: 423 aa.
IPR000007 Tubby, C-terminal
method AccNumber shortName E-value location
FPrintScan PR01573 SUPERTUBBY 6.5e-65 169-185
185-209
234-261
327-344
345-361
380-399
401-423
Gene3D G3DSA:3.20.90.10 no description 4.1e-83 316-417
HMMPfam PF01167 Tub 2.4e-99 117-417
IPR001810 F-box domain, cyclin-like
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 1.4e-08 52-99
superfamily SSF81383 F-box 7.3e-07 43-96
IPR018066 Tubby, C-terminal, conserved site
PatternScan PS01200 TUB_1 NA 345-358
PatternScan PS01201 TUB_2 NA 408-423
IPR025659 Tubby C-terminal-like domain
superfamily SSF54518 Tubby 8.2e-95 101-423
no_ID  
Gene3D G3DSA:1.20.1280.50 no description 1.7e-05 49-96
HMMPanther PTHR16517 TUBBY-RELATED 1.1e-221 1-423
HMMPanther PTHR16517:SF7 TUBBY 1.1e-221 1-423
Seg seg seg NA 202-214
361-376
Wolf-PSORT
Lj0g3v0186729.1	nucl 7.5, cyto_nucl 5, mito 3.5, chlo_mito 2.5, cyto 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0186729.1