Miyakogusa Predicted Gene

Lj0g3v0185859.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1KEI2_SOYBN 1063 82.2 87.3 (tr|I1KEI2) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G54250.2 961 74.0 82.8 | Symbols: ATCNGC4, CNGC4, HLM1, DND2 | cyclic nucleotide-gated cation channel 4 | chr5:22025684-22029971 REVERSE LENGTH=694
Medicago Medtr8g464570.1 1072 83.2 89.4 | cyclic nucleotide-gated ion channel-like protein | HC | chr8:22836589-22852508 | 20130731
Soybean Glyma06g42310.1 1062 82.2 87.3  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0185859.1 length: 635 aa.
IPR000595 Cyclic nucleotide-binding domain
method AccNumber shortName E-value location
HMMPfam PF00027 cNMP_binding 3.9e-07 459-548
ProfileScan PS50042 CNMP_BINDING_3 11.631 438-517
IPR014710 RmlC-like jelly roll fold
Gene3D G3DSA:2.60.120.10 no description 3.2e-20 434-550
IPR018490 Cyclic nucleotide-binding-like
superfamily SSF51206 cAMP-binding 6e-37 363-569
no_ID  
Gene3D G3DSA:1.10.287.630 no description 2.2e-11 361-429
Gene3D G3DSA:1.10.287.70 no description 1.2e-10 300-358
HMMPanther PTHR10217 VOLTAGE 0 31-619
HMMPanther PTHR10217:SF418SUBFAMILY NOT 0 31-619
Seg seg seg NA 524-536
600-611
superfamily SSF81324 Voltage-gated 3.5e-20 32-400
Putative transmembrane regions
  From To
TM segments
SOSUI
54 76
131 153
158 180
195 217
335 357
Wolf-PSORT
Lj0g3v0185859.1	plas 11, mito 1, E.R. 1, pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0185859.1