Miyakogusa Predicted Gene

Lj0g3v0185729.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7LEA6_MEDTR 328 83.2 92.2 (tr|G7LEA6) Protein transport protein SEC23 OS=Medicago truncatula GN=MTR_8g011270 PE=4 SV=1
TAIR_pep AT3G23660.2 219 55.4 68.4 | Symbols: | Sec23/Sec24 protein transport family protein | chr3:8513666-8517729 REVERSE LENGTH=791
Medicago Medtr8g011270.1 328 83.2 92.2 | protein transporter Sec23-like protein | HC | chr8:2969140-2977863 | 20130731
Soybean Glyma03g22740.1 320 76.6 86.3  
LJGI gnl|LJGI|FS322399 1170 99.7 99.7 similar to UniRef100_A7QJV5 Cluster: Chromosome undetermined scaffold_108, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_108, whole genome shotgun sequence - Vitis vinifera (Grape), partial (29%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0185729.1 length: 199 aa.
IPR006895 Zinc finger, Sec23/Sec24-type
method AccNumber shortName E-value location
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0006888 ER to Golgi vesicle-mediated transport    
Molecular Function GO:0008270 zinc ion binding    
Cellular Component GO:0030127 COPII vesicle coat    
HMMPfam PF04810 zf-Sec23_Sec24 1.2e-17 53-92
superfamily SSF82919 Zn-finger 1.2e-23 44-120
IPR006896 Sec23/Sec24, trunk domain
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0006888 ER to Golgi vesicle-mediated transport    
Cellular Component GO:0030127 COPII vesicle coat    
HMMPfam PF04811 Sec23_trunk 3.3e-12 123-174
no_ID  
Gene3D G3DSA:2.60.40.1670 no description 1.5e-37 3-175
HMMPanther PTHR11141 PROTEIN 7.9e-89 1-172
superfamily SSF53300 vWA-like 1.2e-15 123-176
superfamily SSF81995 beta-sandwich 9.7e-21 3-62
Wolf-PSORT
Lj0g3v0185729.1	chlo 5, cyto 5, extr 3, cyto_nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0185729.1