Miyakogusa Predicted Gene

Lj0g3v0185019.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7LES7_MEDTR 315 75.1 81.6 (tr|G7LES7) Tubby-like F-box protein OS=Medicago truncatula GN=MTR_8g077680 PE=4 SV=1
TAIR_pep AT4G36630.1 239 55.9 72.5 | Symbols: EMB2754 | Vacuolar sorting protein 39 | chr4:17272088-17276524 REVERSE LENGTH=1000
Medicago Medtr8g077680.1 317 75.1 81.6 | vam6/Vps39-like protein | HC | chr8:33049752-33042308 | 20130731
Soybean Glyma01g38240.1 311 71.1 81.2  
LJGI gnl|LJGI|TC67218 250 100.0 100.0 similar to UniRef100_A7PUV1 Cluster: Chromosome chr4 scaffold_32, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_32, whole genome shotgun sequence - Vitis vinifera (Grape), partial (19%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0185019.1 length: 217 aa.
IPR019453 Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2
method AccNumber shortName E-value location
HMMPfam PF10367 Vps39_2 5.6e-08 164-217
no_ID  
HMMPanther PTHR12894 CNH 2.6e-77 1-217
HMMPanther PTHR12894:SF5 TGF 2.6e-77 1-217
Seg seg seg NA 133-149
Wolf-PSORT
Lj0g3v0185019.1	nucl 6, cyto 3, cysk_nucl 3, mito 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0185019.1