Miyakogusa Predicted Gene

Lj0g3v0184509.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T7Y9_LOTJA 453 86.9 86.9 (tr|I3T7Y9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G44920.1 241 52.2 65.9 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3054 (InterPro:IPR021414); Has 246 Blast hits to 246 proteins in 119 species: Archae - 14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | chr1:16983229-16984408 REVERSE LENGTH=258
Medicago Medtr1g017450.1 312 67.5 73.6 | transmembrane protein, putative | HC | chr1:4869439-4866395 | 20130731
Soybean Glyma17g35070.1 361 72.5 77.0  
LJGI gnl|LJGI|TC60169 1594 100.0 100.0 similar to UniRef100_A7NUC6 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (69%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0184509.1 length: 267 aa.
IPR021414 Protein of unknown function DUF3054
method AccNumber shortName E-value location
HMMPfam PF11255 DUF3054 4.6e-26 122-232
no_ID  
Seg seg seg NA 63-81
116-131
Putative transmembrane regions
  From To
TM segments
SOSUI		 115 137
181 203
218 240
Wolf-PSORT
Lj0g3v0184509.1	chlo 12, plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0184509.1