Miyakogusa Predicted Gene
- Lj0g3v0184459.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
A3A9I4_ORYSJ |
115 |
94.3 |
100.0 |
(tr|A3A9I4) Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_07700 PE=4 SV=1 |
| TAIR_pep |
AT1G12260.1 |
109 |
88.7 |
98.1 |
| Symbols: VND4, EMB2749, ANAC007, NAC007 | NAC 007 | chr1:4163058-4164486 REVERSE LENGTH=395 |
| Medicago |
Medtr5g012080.1 |
112 |
94.3 |
98.1 |
| transcription factor | HC | chr5:3572221-3576785 | 20130731 |
| Soybean |
Glyma11g03340.1 |
114 |
96.2 |
100.0 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0184459.1 |
length: 53 aa. |
| IPR003441 |
No apical meristem (NAM) protein |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003677 |
DNA binding |
|
|
| Biological Process |
GO:0006355 |
regulation of transcription, DNA-dependent |
|
|
| HMMPfam |
PF02365 |
NAM |
6.8e-18 |
7-53 |
| ProfileScan |
PS51005 |
NAC |
22.027 |
7-53 |
| superfamily |
SSF101941 |
NAC |
2.9e-16 |
3-52 |
| no_ID |
|
| HMMPanther |
PTHR31989 |
FAMILY |
6.6e-31 |
1-53 |
| HMMPanther |
PTHR31989:SF0 |
SUBFAMILY |
6.6e-31 |
1-53 |
- Wolf-PSORT
Lj0g3v0184459.1 cyto 7, pero 3, mito 2, chlo 1, nucl 1, cyto_mito 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0184459.1 |
|