Miyakogusa Predicted Gene

Lj0g3v0183609.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1KW21_SOYBN 1087 72.7 79.3 (tr|I1KW21) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G18290.1 791 57.6 69.5 | Symbols: KAT2 | potassium channel in Arabidopsis thaliana 2 | chr4:10115418-10118477 FORWARD LENGTH=697
Medicago Medtr2g019530.1 973 63.2 74.5 | inwardly rectifying potassium channel subunit | HC | chr2:6389141-6384845 | 20130731
Soybean Glyma08g24960.1 1087 72.7 79.3  
LJGI gnl|LJGI|TC65833 63.9 83.5 83.5 homologue to UniRef100_A7QWI8 Cluster: Chromosome chr10 scaffold_204, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr10 scaffold_204, whole genome shotgun sequence - Vitis vinifera (Grape), partial (36%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0183609.1 length: 735 aa.
IPR000595 Cyclic nucleotide-binding domain
method AccNumber shortName E-value location
HMMPfam PF00027 cNMP_binding 2.4e-13 389-476
HMMSmart SM00100 Cyclic 1.2e-23 369-486
ProfileScan PS50042 CNMP_BINDING_3 23.368 369-488
IPR003938 Potassium channel, voltage-dependent, EAG/ELK/ERG
Molecular Function GO:0005249 voltage-gated potassium channel activity    
Biological Process GO:0006813 potassium ion transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR01463 EAGCHANLFMLY 1.1e-08 64-71
87-97
98-107
239-256
265-276
283-292
IPR005821 Ion transport domain
Molecular Function GO:0005216 ion channel activity    
Biological Process GO:0006811 ion transport    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00520 Ion_trans 5.9e-22 85-287
IPR014710 RmlC-like jelly roll fold
Gene3D G3DSA:2.60.120.10 no description 3.5e-21 357-478
IPR018490 Cyclic nucleotide-binding-like
superfamily SSF51206 cAMP-binding 2.4e-45 295-491
IPR021789 Potassium channel, plant-type
HMMPfam PF11834 DUF3354 5.2e-25 656-725
ProfileScan PS51490 KHA 27.525 657-735
no_ID  
Gene3D G3DSA:1.10.287.70 no description 1.2e-43 52-291
HMMPanther PTHR10217 VOLTAGE 1.3e-146 32-474
HMMPanther PTHR10217:SF7 CYCLIC 1.3e-146 32-474
Seg seg seg NA 162-173
482-496
superfamily SSF81324 Voltage-gated 4.9e-42 45-291
Putative transmembrane regions
  From To
TM segments
SOSUI
54 74
84 106
189 211
Wolf-PSORT
Lj0g3v0183609.1	plas 11.5, mito_plas 6.5, E.R. 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0183609.1