Miyakogusa Predicted Gene

Lj0g3v0181439.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S4V5_LOTJA 536 100.0 100.0 (tr|I3S4V5) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G26880.2 336 63.7 76.8 | Symbols: | AGAMOUS-like 26 | chr5:9457950-9459190 REVERSE LENGTH=263
Medicago Medtr3g027870.1 400 78.9 83.9 | tRNA/rRNA methyltransferase SpoU family protein | HC | chr3:8786548-8791874 | 20130731
Soybean Glyma08g16210.1 410 80.9 87.8  
LJGI gnl|LJGI|TC67142 1552 100.0 100.0 similar to UniRef100_A7QWV8 Cluster: Chromosome chr13 scaffold_210, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_210, whole genome shotgun sequence - Vitis vinifera (Grape), partial (73%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0181439.1 length: 259 aa.
IPR001537 tRNA/rRNA methyltransferase, SpoU
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
Biological Process GO:0006396 RNA processing    
Molecular Function GO:0008173 RNA methyltransferase activity    
HMMPfam PF00588 SpoU_methylase 5.9e-31 78-227
IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase
Biological Process GO:0001510 RNA methylation    
Molecular Function GO:0008168 methyltransferase activity    
HAMAP MF_01885 tRNA_methyltr_TrmL 46.918 78-236
no_ID  
Gene3D G3DSA:3.40.1280.10 no description 5.5e-57 74-238
HMMPanther PTHR12029 RNA 1.6e-92 51-255
HMMPanther PTHR12029:SF31 SUBFAMILY 1.6e-92 51-255
superfamily SSF75217 alpha/beta 5.8e-35 63-237
Wolf-PSORT
Lj0g3v0181439.1	chlo 9, mito 4.5, cyto_mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0181439.1