Miyakogusa Predicted Gene

Lj0g3v0181429.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1L7Y5_SOYBN 918 75.9 81.7 (tr|I1L7Y5) Uncharacterized protein OS=Glycine max PE=4 SV=2

TAIR_pep AT2G47940.1 823 67.4 78.0 | Symbols: DEGP2 | DEGP protease 2 | chr2:19618372-19622164 REVERSE LENGTH=607

Medicago Medtr1g088980.1 884 72.8 78.6 | DegP protease | HC | chr1:39969497-39960538 | 20130731

Soybean Glyma10g02660.1 807 68.5 74.9

LJGI gnl|LJGI|TC61281 1324 100.0 100.0 similar to UniRef100_O82261 Cluster: Protease Do-like 2, chloroplast precursor; n=1; Arabidopsis thaliana|Rep: Protease Do-like 2, chloroplast precursor - Arabidopsis thaliana (Mouse-ear cress), partial (19%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0181429.1 length: 602 aa.

IPR001254 Peptidase S1

method AccNumber shortName E-value location

Molecular Function GO:0004252 serine-type endopeptidase activity

Biological Process GO:0006508 proteolysis

HMMPfam PF00089 Trypsin 6.8e-22 120-300

IPR001478 PDZ domain

Molecular Function GO:0005515 protein binding

HMMPfam PF13180 PDZ_2 1.6e-07 318-415

superfamily SSF50156 PDZ 1.9e-07 287-413

IPR001940 Peptidase S1C

Molecular Function GO:0004252 serine-type endopeptidase activity

Biological Process GO:0006508 proteolysis

FPrintScan PR00834 PROTEASES2C 1.6e-11 148-160
170-190
249-266
357-369

IPR009003 Trypsin-like cysteine/serine peptidase domain

Molecular Function GO:0003824 catalytic activity

superfamily SSF50494 Trypsin-like 1.3e-45 98-313

IPR015724 Serine endopeptidase DegP2

HMMPanther PTHR22939:SF1 SERINE 3.3e-238 85-546

no_ID

Gene3D G3DSA:2.30.42.10 no description 1.6e-09 316-418

Gene3D G3DSA:2.40.10.10 no description 8.2e-25 111-196
210-314

HMMPanther PTHR22939 SERINE 3.3e-238 85-546

Seg seg seg NA 84-101
445-456
537-551

Wolf-PSORT

Lj0g3v0181429.1 chlo 13

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0181429.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1L7Y5_SOYBN	918	75.9	81.7	(tr\|I1L7Y5) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep	AT2G47940.1	823	67.4	78.0	\| Symbols: DEGP2 \| DEGP protease 2 \| chr2:19618372-19622164 REVERSE LENGTH=607
Medicago	Medtr1g088980.1	884	72.8	78.6	\| DegP protease \| HC \| chr1:39969497-39960538 \| 20130731
Soybean	Glyma10g02660.1	807	68.5	74.9
LJGI	gnl\|LJGI\|TC61281	1324	100.0	100.0	similar to UniRef100_O82261 Cluster: Protease Do-like 2, chloroplast precursor; n=1; Arabidopsis thaliana\|Rep: Protease Do-like 2, chloroplast precursor - Arabidopsis thaliana (Mouse-ear cress), partial (19%)

IPR001254	Peptidase S1
Lj0g3v0181429.1				length: 602 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0004252	serine-type endopeptidase activity
Biological Process	GO:0006508	proteolysis
HMMPfam	PF00089	Trypsin	6.8e-22	120-300
IPR001478	PDZ domain
Molecular Function	GO:0005515	protein binding
HMMPfam	PF13180	PDZ_2	1.6e-07	318-415
superfamily	SSF50156	PDZ	1.9e-07	287-413
IPR001940	Peptidase S1C
Molecular Function	GO:0004252	serine-type endopeptidase activity
Biological Process	GO:0006508	proteolysis
FPrintScan	PR00834	PROTEASES2C	1.6e-11	148-160 170-190 249-266 357-369
IPR009003	Trypsin-like cysteine/serine peptidase domain
Molecular Function	GO:0003824	catalytic activity
superfamily	SSF50494	Trypsin-like	1.3e-45	98-313
IPR015724	Serine endopeptidase DegP2
HMMPanther	PTHR22939:SF1	SERINE	3.3e-238	85-546
no_ID
Gene3D	G3DSA:2.30.42.10	no description	1.6e-09	316-418
Gene3D	G3DSA:2.40.10.10	no description	8.2e-25	111-196 210-314
HMMPanther	PTHR22939	SERINE	3.3e-238	85-546
Seg	seg	seg	NA	84-101 445-456 537-551