Miyakogusa Predicted Gene

Lj0g3v0180849.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL G7K3E8_MEDTR 115 55.3 66.7 (tr|G7K3E8) Uncharacterized protein OS=Medicago truncatula GN=MTR_5g091900 PE=2 SV=1

TAIR_pep AT5G16550.1 60.1 43.2 62.2 | Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:5405526-5406641 FORWARD LENGTH=249

Medicago Medtr5g091900.1 115 55.3 66.7 | transmembrane protein, putative | HC | chr5:40105123-40108128 | 20130731

Soybean Glyma11g33370.1 114 52.6 64.9

LJGI gnl|LJGI|TC76520 728 100.0 100.0 weakly similar to UniRef100_A7PZ23 Cluster: Chromosome chr4 scaffold_39, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_39, whole genome shotgun sequence - Vitis vinifera (Grape), partial (52%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0180849.1 length: 158 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 13-31
52-66

Wolf-PSORT

Lj0g3v0180849.1 chlo 8, nucl 3, mito 2, nucl_plas 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0180849.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	G7K3E8_MEDTR	115	55.3	66.7	(tr\|G7K3E8) Uncharacterized protein OS=Medicago truncatula GN=MTR_5g091900 PE=2 SV=1
TAIR_pep	AT5G16550.1	60.1	43.2	62.2	\| Symbols: \| unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). \| chr5:5405526-5406641 FORWARD LENGTH=249
Medicago	Medtr5g091900.1	115	55.3	66.7	\| transmembrane protein, putative \| HC \| chr5:40105123-40108128 \| 20130731
Soybean	Glyma11g33370.1	114	52.6	64.9
LJGI	gnl\|LJGI\|TC76520	728	100.0	100.0	weakly similar to UniRef100_A7PZ23 Cluster: Chromosome chr4 scaffold_39, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr4 scaffold_39, whole genome shotgun sequence - Vitis vinifera (Grape), partial (52%)

no_ID
Lj0g3v0180849.1				length: 158 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	13-31 52-66