Miyakogusa Predicted Gene
- Lj0g3v0180419.3
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7ME49_SOYBN |
921 |
84.3 |
93.3 |
(tr|K7ME49) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G31960.2 |
776 |
69.7 |
85.4 |
| Symbols: GSL03 | glucan synthase-like 3 | chr2:13589545-13600066 FORWARD LENGTH=1950 |
| Medicago |
Medtr2g061380.3 |
910 |
84.5 |
92.1 |
| glucan synthase-like protein | HC | chr2:26018390-25999451 | 20130731 |
| Soybean |
Glyma15g42330.1 |
921 |
84.3 |
93.3 |
|
| LJGI |
gnl|LJGI|TC69483 |
975 |
100.0 |
100.0 |
similar to UniRef100_A7QR97 Cluster: Chromosome chr13 scaffold_149, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_149, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0180419.3 |
length: 521 aa. |
| IPR026953 |
Callose synthase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003843 |
1,3-beta-D-glucan synthase activity |
|
|
| HMMPanther |
PTHR12741:SF4 |
SUBFAMILY |
3e-296 |
1-521 |
| no_ID |
|
| HMMPanther |
PTHR12741 |
LYST-INTERACTING |
3e-296 |
1-521 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
9 |
31 |
| 54 |
76 |
| 115 |
137 |
| 167 |
189 |
- Wolf-PSORT
Lj0g3v0180419.3 plas 8, chlo 4, nucl_plas 4, golg_plas 4, cysk_plas 4, E.R._plas 4, cyto_plas 4
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0180419.3 |
|