Miyakogusa Predicted Gene

Lj0g3v0180319.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1L0U6_SOYBN 321 82.3 91.7 (tr|I1L0U6) Importin subunit alpha OS=Glycine max PE=3 SV=1
TAIR_pep AT4G16143.2 298 76.4 88.2 | Symbols: IMPA-2 | importin alpha isoform 2 | chr4:9134450-9137134 REVERSE LENGTH=535
Medicago Medtr2g034900.1 315 81.2 91.6 | importin subunit alpha-1b | HC | chr2:13400262-13404524 | 20130731
Soybean Glyma09g04430.1 321 82.3 91.7  
LJGI gnl|LJGI|TC59122 1112 100.0 100.0 similar to UniRef100_A1YUL9 Cluster: Impa2; n=1; Nicotiana benthamiana|Rep: Impa2 - Nicotiana benthamiana, partial (53%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0180319.1 length: 187 aa.
IPR000225 Armadillo
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00514 Arm 5.7e-14 102-142
145-183
HMMSmart SM00185 Armadillo/beta-catenin-like 6.7e-10 101-142
144-184
ProfileScan PS50176 ARM_REPEAT 10.202 155-187
112-155
IPR002652 Importin-alpha, importin-beta-binding domain
Cellular Component GO:0005634 nucleus    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006606 protein import into nucleus    
Molecular Function GO:0008565 protein transporter activity    
HMMPfam PF01749 IBB 4.3e-22 5-91
ProfileScan PS51214 IBB 15.197 1-58
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 2.3e-44 10-187
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 6.1e-39 3-187
no_ID  
HMMPanther PTHR23316 IMPORTIN 1.9e-85 6-187
Wolf-PSORT
Lj0g3v0180319.1	chlo 5, nucl 4, mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0180319.1