| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I1KKN4_SOYBN | 137 | 81.8 | 88.3 | (tr|I1KKN4) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT1G27650.2 | 131 | 79.2 | 87.0 | | Symbols: ATU2AF35A | U2 snRNP auxiliary factor small subunit, putative | chr1:9615302-9616042 FORWARD LENGTH=246 |
| Medicago | Medtr1g035130.6 | 128 | 77.9 | 83.1 | | splicing factor U2af small subunit A-like protein | HC | chr1:12643111-12639099 | 20130731 |
| Soybean | Glyma07g20090.2 | 137 | 81.8 | 88.3 | |
| LJGI | gnl|LJGI|TC72712 | 898 | 99.8 | 99.8 | similar to UniRef100_A7QPI3 Cluster: Chromosome chr18 scaffold_137, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_137, whole genome shotgun sequence - Vitis vinifera (Grape), partial (83%) |
| Lj0g3v0180079.1 | length: 153 aa. | |||
| IPR000571 | Zinc finger, CCCH-type | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| HMMPfam | PF00642 | zf-CCCH | 9.2e-05 | 43-66 |
| ProfileScan | PS50103 | ZF_C3H1 | 11.498 | 41-68 |
| IPR009145 | U2 auxiliary factor small subunit | |||
| Molecular Function | GO:0003723 | RNA binding | ||
| Cellular Component | GO:0005634 | nucleus | ||
| FPrintScan | PR01848 | U2AUXFACTOR | 1.3e-16 | 23-47 58-70 |
| HMMPanther | PTHR12620 | U2 | 4.8e-54 | 1-153 |
| IPR012677 | Nucleotide-binding, alpha-beta plait | |||
| Molecular Function | GO:0000166 | nucleotide binding | ||
| Gene3D | G3DSA:3.30.70.330 | no description | 6.8e-09 | 2-38 |
| no_ID | ||||
| Seg | seg | seg | NA | 15-22 78-143 |
| superfamily | SSF54928 | RNA-binding | 5.1e-10 | 1-48 |
Lj0g3v0180079.1 nucl 14
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0180079.1 |