Miyakogusa Predicted Gene

Lj0g3v0179539.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SMI4_LOTJA 171 100.0 100.0 (tr|I3SMI4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G07410.1 121 73.3 84.9 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B, RABA2b | RAB GTPase homolog A2B | chr1:2276270-2277154 FORWARD LENGTH=214
Medicago Medtr3g069510.1 162 91.8 100.0 | RAB GTPase-like protein A1D | HC | chr3:31090285-31088261 | 20130731
Soybean Glyma18g03760.1 159 89.4 97.6  
LJGI gnl|LJGI|TC78859 505 100.0 100.0 homologue to UniRef100_A7PIM3 Cluster: Chromosome chr13 scaffold_17, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_17, whole genome shotgun sequence - Vitis vinifera (Grape), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0179539.1 length: 85 aa.
IPR001806 Small GTPase superfamily
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMPfam PF00071 Ras 4.5e-12 1-54
IPR003579 Small GTPase superfamily, Rab type
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 Rab 0.00094 1-56
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 4e-09 1-61
no_ID  
Gene3D G3DSA:3.40.50.300 no description 7.1e-15 1-70
HMMPanther PTHR24073 FAMILY 4.2e-24 1-73
HMMPanther PTHR24073:SF87 SUBFAMILY 4.2e-24 1-73
ProfileScan PS51419 RAB 10.339 1-85
Wolf-PSORT
Lj0g3v0179539.1	nucl_plas 5.5, plas 5, nucl 4, cyto 3, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0179539.1