Miyakogusa Predicted Gene

Lj0g3v0175829.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3S8F3_LOTJA 1031 90.8 90.8 (tr|I3S8F3) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT3G15160.1 706 64.5 75.7 | Symbols: | unknown protein; Has 266 Blast hits to 264 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 0; Plants - 199; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). | chr3:5104582-5108279 FORWARD LENGTH=562

Medicago Medtr4g081050.1 927 81.2 86.5 | AP-5 complex subunit zeta-like protein | HC | chr4:31338825-31349491 | 20130731

Soybean Glyma06g42370.1 904 80.3 85.4

LJGI gnl|LJGI|FS325640 1384 98.9 98.9 similar to UniRef100_A7P0V3 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (39%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0175829.1 length: 567 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 142-154
239-251
401-405
413-431

Wolf-PSORT

Lj0g3v0175829.1 plas 9, vacu 2, golg 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0175829.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3S8F3_LOTJA	1031	90.8	90.8	(tr\|I3S8F3) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT3G15160.1	706	64.5	75.7	\| Symbols: \| unknown protein; Has 266 Blast hits to 264 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 0; Plants - 199; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). \| chr3:5104582-5108279 FORWARD LENGTH=562
Medicago	Medtr4g081050.1	927	81.2	86.5	\| AP-5 complex subunit zeta-like protein \| HC \| chr4:31338825-31349491 \| 20130731
Soybean	Glyma06g42370.1	904	80.3	85.4
LJGI	gnl\|LJGI\|FS325640	1384	98.9	98.9	similar to UniRef100_A7P0V3 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (39%)

no_ID
Lj0g3v0175829.1				length: 567 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	142-154 239-251 401-405 413-431