Miyakogusa Predicted Gene

Lj0g3v0175819.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL M7Z4Q9_TRIUA 905 99.8 99.8 (tr|M7Z4Q9) Polyubiquitin-A OS=Triticum urartu GN=TRIUR3_08047 PE=4 SV=1
TAIR_pep AT4G05320.4 903 100.0 100.0 | Symbols: UBQ10 | polyubiquitin 10 | chr4:2718559-2719932 FORWARD LENGTH=457
Medicago Medtr4g088495.1 903 100.0 100.0 | polyubiquitin 3 | HC | chr4:35112345-35108618 | 20130731
Soybean Glyma13g24470.1 904 100.0 100.0  
LJGI gnl|LJGI|TC78962 1447 88.4 88.4 UniRef100_Q42397 Cluster: Hexaubiquitin protein; n=1; Helianthus annuus|Rep: Hexaubiquitin protein - Helianthus annuus (Common sunflower), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0175819.1 length: 457 aa.
IPR000626 Ubiquitin
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00240 ubiquitin 1.6e-33 6-74
82-150
158-226
234-302
310-378
386-454
HMMSmart SM00213 Ubiquitin 3e-35 1-72
77-148
153-224
229-300
305-376
381-452
IPR019954 Ubiquitin conserved site
PatternScan PS00299 UBIQUITIN_1 NA 27-52
103-128
179-204
255-280
331-356
407-432
IPR019955 Ubiquitin supergroup
ProfileScan PS50053 UBIQUITIN_2 30.452 1-76
77-152
153-228
229-304
305-380
381-456
IPR019956 Ubiquitin subgroup
FPrintScan PR00348 UBIQUITIN 7.4e-38 11-31
32-52
53-74
no_ID  
Gene3D G3DSA:3.10.20.90 no description 1.2e-48 1-77
78-154
155-230
231-306
307-381
382-457
HMMPanther PTHR10666 UBIQUITIN 0 1-456
superfamily SSF54236 Ubiquitin-like 1e-34 1-76
77-152
153-228
229-304
305-380
381-456
Wolf-PSORT
Lj0g3v0175819.1	cyto 8, cyto_nucl 7, chlo 2, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0175819.1