Miyakogusa Predicted Gene
- Lj0g3v0174579.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
C6TAG2_SOYBN |
153 |
53.1 |
57.7 |
(tr|C6TAG2) Uncharacterized protein OS=Glycine max PE=2 SV=1 |
| TAIR_pep |
AT3G03210.1 |
99.8 |
85.2 |
92.6 |
| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 59 Blast hits to 59 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | chr3:740987-742093 FORWARD LENGTH=368 |
| Medicago |
Medtr5g076930.1 |
149 |
56.1 |
59.5 |
| Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein | HC | chr5:32817051-32819013 | 20130731 |
| Soybean |
Glyma14g39110.1 |
153 |
53.1 |
57.7 |
|
| LJGI |
gnl|LJGI|TC70632 |
95.6 |
87.5 |
87.5 |
weakly similar to UniRef100_P13983 Cluster: Extensin precursor; n=1; Nicotiana tabacum|Rep: Extensin precursor - Nicotiana tabacum (Common tobacco), partial (6%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0174579.1 |
length: 137 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Seg |
seg |
seg |
NA |
55-83 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
3 |
25 |
| 31 |
53 |
- Wolf-PSORT
Lj0g3v0174579.1 chlo 5, extr 3, chlo_mito 3, nucl 1, cyto 1, mito 1, plas 1, vacu 1, E.R. 1, cyto_nucl 1, nucl_plas 1, E.R._vacu 1, E.R._plas 1, mito_plas 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0174579.1 |
|