Miyakogusa Predicted Gene
- Lj0g3v0174419.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7IT01_MEDTR |
180 |
41.3 |
58.0 |
(tr|G7IT01) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_2g059080 PE=4 SV=1 |
| TAIR_pep |
AT2G25640.1 |
114 |
35.8 |
55.7 |
| Symbols: | SPOC domain / Transcription elongation factor S-II protein | chr2:10910836-10913908 FORWARD LENGTH=745 |
| Medicago |
Medtr3g108010.1 |
107 |
37.7 |
55.8 |
| SPOC domain/transcription elongation factor S-II, putative | HC | chr3:49909087-49915326 | 20130731 |
| Soybean |
Glyma06g07700.1 |
106 |
36.4 |
55.8 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0174419.1 |
length: 502 aa. |
| IPR012921 |
Spen paralogue and orthologue SPOC, C-terminal |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF07744 |
SPOC |
3.6e-11 |
98-204 |
| no_ID |
|
| HMMPanther |
PTHR11477 |
TRANSCRIPTION |
3.4e-21 |
95-270 |
- Wolf-PSORT
Lj0g3v0174419.1 nucl 7, chlo 5, mito 1, cysk 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0174419.1 |
|