Miyakogusa Predicted Gene

Lj0g3v0174029.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL O82460_LOTJA 644 80.8 80.8 (tr|O82460) Rac GTPase activating protein 3 (Fragment) OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G03100.1 403 67.6 76.0 | Symbols: | Rho GTPase activating protein with PAK-box/P21-Rho-binding domain | chr4:1374361-1375913 FORWARD LENGTH=430
Medicago Medtr1g089500.1 456 55.9 63.5 | Rac GTPase activating protein | HC | chr1:39993064-39989777 | 20130731
Soybean Glyma03g36630.1 509 66.4 71.8  
LJGI gnl|LJGI|TC57167 2403 99.5 99.5 UniRef100_O82460 Cluster: Rac GTPase activating protein 3; n=1; Lotus japonicus|Rep: Rac GTPase activating protein 3 - Lotus japonicus, complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0174029.1 length: 411 aa.
IPR000095 PAK-box/P21-Rho-binding
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:3.90.810.10 no description 0.00012 19-47
HMMPfam PF00786 PBD 8.5e-06 20-55
HMMSmart SM00285 P21-Rho-binding 0.0012 21-55
IPR000198 Rho GTPase-activating protein domain
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007165 signal transduction    
Gene3D G3DSA:1.10.555.10 no description 9.8e-33 57-239
HMMPfam PF00620 RhoGAP 1.5e-23 83-220
HMMSmart SM00324 GTPase-activator 1.4e-30 80-243
ProfileScan PS50238 RHOGAP 24.526 66-247
IPR008936 Rho GTPase activation protein
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007165 signal transduction    
superfamily SSF48350 GTPase 1.4e-36 58-239
no_ID  
HMMPanther PTHR23177 MKIAA1688 1.2e-192 16-383
HMMPanther PTHR23177:SF2 GTPASE 1.2e-192 16-383
Seg seg seg NA 52-70
255-266
294-314
365-385
Wolf-PSORT
Lj0g3v0174029.1	nucl 6, cyto 5, chlo 1, plas 1, cysk 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0174029.1