Miyakogusa Predicted Gene

Lj0g3v0173889.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7I2E6_MEDTR 865 63.6 71.8 (tr|G7I2E6) Zinc finger protein OS=Medicago truncatula GN=MTR_1g019200 PE=4 SV=1
TAIR_pep AT5G42940.1 283 33.3 45.7 | Symbols: | RING/U-box superfamily protein | chr5:17216649-17219171 REVERSE LENGTH=691
Medicago Medtr1g019200.3 865 63.6 71.8 | zinc finger (C3HC4-type RING finger) family protein | HC | chr1:5742351-5747156 | 20130731
Soybean Glyma06g04410.1 744 58.1 67.2  
LJGI gnl|LJGI|TC69484 1118 100.0 100.0 similar to UniRef100_Q00M69 Cluster: Zinc finger protein; n=1; Glycine max|Rep: Zinc finger protein - Glycine max (Soybean), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0173889.1 length: 745 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 1.2e-13 697-740
HMMSmart SM00184 Ring 3.6e-06 698-738
ProfileScan PS50089 ZF_RING_2 11.929 698-739
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 4e-14 694-740
no_ID  
HMMPanther PTHR14155 RING 9.5e-63 13-741
HMMPanther PTHR14155:SF29 OS04G0590900 9.5e-63 13-741
Seg seg seg NA 219-230
343-352
606-621
superfamily SSF57850 RING/U-box 4.5e-18 648-745
Wolf-PSORT
Lj0g3v0173889.1	nucl 11, cyto 1, vacu 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0173889.1