Miyakogusa Predicted Gene

Lj0g3v0173859.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C6TAQ3_SOYBN 503 76.0 82.0 (tr|C6TAQ3) Uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep AT1G45976.1 348 54.1 67.4 | Symbols: SBP1 | S-ribonuclease binding protein 1 | chr1:17199371-17200680 FORWARD LENGTH=325
Medicago Medtr1g019250.1 499 74.7 82.4 | SBP (S-ribonuclease-binding protein) family protein | HC | chr1:5760299-5762861 | 20130731
Soybean Glyma14g09220.1 503 76.0 82.0  
LJGI gnl|LJGI|TC66387 1679 98.9 98.9 similar to UniRef100_A7NTX8 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (88%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0173859.1 length: 359 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
ProfileScan PS50089 ZF_RING_2 9.716 313-348
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 0.00011 306-350
IPR017066 S-ribonuclease binding protein, SBP1, pollen
HMMPIR PIRSF036836 Ribonuclease-binding 7.6e-101 10-359
no_ID  
Coil coil coiled-coil NA 195-237
HMMPanther PTHR14493 UNCHARACTERIZED 1.2e-16 148-359
HMMPanther PTHR14493:SF7 SUBFAMILY 1.2e-16 148-359
HMMPfam PF13920 zf-C3HC4_3 5.1e-09 312-350
Seg seg seg NA 7-23
36-42
56-67
151-165
Wolf-PSORT
Lj0g3v0173859.1	nucl 12, plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0173859.1