Miyakogusa Predicted Gene

Lj0g3v0171439.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NH37_SOYBN 529 85.2 88.8 (tr|I1NH37) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT1G43170.8 478 78.6 85.9 | Symbols: RP1 | ribosomal protein 1 | chr1:16266992-16268631 FORWARD LENGTH=389
Medicago Medtr1g098540.1 501 87.6 92.6 | 60S ribosomal protein L3B | HC | chr1:44369848-44366402 | 20130731
Soybean Glyma20g30810.1 529 85.2 88.8  
LJGI gnl|LJGI|TC58792 1604 99.3 99.3 homologue to UniRef100_Q6TKR0 Cluster: Ribosomal protein L3A; n=1; Nicotiana tabacum|Rep: Ribosomal protein L3A - Nicotiana tabacum (Common tobacco), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0171439.1 length: 286 aa.
IPR000597 Ribosomal protein L3
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HMMPfam PF00297 Ribosomal_L3 1.4e-97 50-280
IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel
superfamily SSF50447 Translation 1.5e-88 4-279
IPR019926 Ribosomal protein L3, conserved site
PatternScan PS00474 RIBOSOMAL_L3 NA 212-235
no_ID  
Gene3D G3DSA:2.40.30.10 no description 1.4e-26 265-280
Gene3D G3DSA:3.30.1430.10 no description 5.4e-48 84-197
Gene3D G3DSA:4.10.960.10 no description 1e-34 198-264
HMMPanther PTHR11363 60S 3.5e-220 1-278
Seg seg seg NA 120-135
Wolf-PSORT
Lj0g3v0171439.1	cyto 8, chlo 4, cyto_pero 4, cyto_E.R. 4, cyto_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0171439.1