Miyakogusa Predicted Gene

Lj0g3v0170779.1

Related links:

GeneModel
LORE1 insertion

Predicted Sequence Links:

Translated sequence
Nucleotide sequence

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL Q60DN3_ORYSJ 85.9 61.7 85.0 (tr|Q60DN3) Integrase core domain containing protein OS=Oryza sativa subsp. japonica GN=OSJNBa0038E17.25 PE=4 SV=1

TAIR_pep --No_Hits--

Medicago --No_Hits--

Soybean Glyma16g17690.1 105 34.2 47.6

LJGI --No_Hits--

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0170779.1 length: 219 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 102-123
148-176

Wolf-PSORT

Lj0g3v0170779.1 chlo 9, nucl 3, extr 1, vacu 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0170779.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	Q60DN3_ORYSJ	85.9	61.7	85.0	(tr\|Q60DN3) Integrase core domain containing protein OS=Oryza sativa subsp. japonica GN=OSJNBa0038E17.25 PE=4 SV=1
TAIR_pep	--No_Hits--
Medicago	--No_Hits--
Soybean	Glyma16g17690.1	105	34.2	47.6
LJGI	--No_Hits--

no_ID
Lj0g3v0170779.1				length: 219 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	102-123 148-176