Miyakogusa Predicted Gene
- Lj0g3v0169999.3
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7MJ48_SOYBN |
1122 |
90.0 |
93.6 |
(tr|K7MJ48) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G59910.1 |
833 |
73.6 |
83.2 |
| Symbols: | Ankyrin repeat family protein | chr3:22130779-22133033 REVERSE LENGTH=611 |
| Medicago |
Medtr4g134960.1 |
1055 |
86.0 |
92.4 |
| F-box/ankyrin repeat SKIP35-like protein | HC | chr4:56571472-56578691 | 20130731 |
| Soybean |
Glyma17g00260.1 |
1122 |
90.0 |
93.6 |
|
| LJGI |
gnl|LJGI|TC63600 |
1292 |
100.0 |
100.0 |
similar to UniRef100_A7QB25 Cluster: Chromosome chr5 scaffold_72, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_72, whole genome shotgun sequence - Vitis vinifera (Grape), partial (34%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0169999.3 |
length: 610 aa. |
| IPR020683 |
Ankyrin repeat-containing domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:1.25.40.20 |
no description |
1.2e-06 |
320-432 |
| superfamily |
SSF48403 |
Ankyrin |
1.3e-09 |
307-430 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
140-147 |
- Wolf-PSORT
Lj0g3v0169999.3 cyto 7, chlo 3, nucl 2, vacu 1, pero 1, cysk_nucl 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0169999.3 |
|