Miyakogusa Predicted Gene

Lj0g3v0169319.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JZP1_SOYBN 994 82.1 89.2 (tr|I1JZP1) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G47530.1 749 61.6 76.8 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr3:17517382-17519157 REVERSE LENGTH=591
Medicago Medtr2g018870.1 469 41.9 61.6 | PPR containing plant-like protein | HC | chr2:6013889-6015841 | 20130731
Soybean Glyma05g01020.1 993 82.1 89.2  
LJGI gnl|LJGI|FS320517 1176 100.0 100.0 weakly similar to UniRef100_A7PDL8 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0169319.1 length: 653 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.99 145-174
217-242
320-339
420-444
487-513
HMMPfam PF13041 PPR_2 6.1e-12 243-292
345-393
HMMTigr TIGR00756 PPR: 6.5e-05 146-177
245-280
348-381
384-417
ProfileScan PS51375 PPR 6.095 142-176
243-277
212-242
280-314
346-380
315-345
381-416
417-447
483-517
449-479
no_ID  
HMMPanther PTHR24015 FAMILY 0 95-653
HMMPanther PTHR24015:SF57 OS10G0501000 0 95-653
HMMPfam PF14432 DYW_deaminase 7.5e-13 532-643
Seg seg seg NA 284-294
Wolf-PSORT
Lj0g3v0169319.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0169319.1