Miyakogusa Predicted Gene

Lj0g3v0169239.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KX60_SOYBN 907 80.1 86.2 (tr|I1KX60) Uncharacterized protein OS=Glycine max PE=3 SV=2
TAIR_pep AT4G15560.1 766 68.0 78.8 | Symbols: CLA1, DEF, CLA, DXS, DXPS2 | Deoxyxylulose-5-phosphate synthase | chr4:8884218-8887254 FORWARD LENGTH=717
Medicago Medtr8g068265.1 891 78.9 86.7 | 1-deoxy-D-xylulose-5-phosphate synthase | HC | chr8:28466086-28471025 | 20130731
Soybean Glyma18g28830.1 908 80.0 86.2  
LJGI gnl|LJGI|TC58045 389 89.4 89.4 homologue to UniRef100_Q8L692 Cluster: 1-deoxy-D-xylulose 5-phosphate synthase 2 precursor; n=1; Medicago truncatula|Rep: 1-deoxy-D-xylulose 5-phosphate synthase 2 precursor - Medicago truncatula (Barrel medic), partial (32%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0169239.1 length: 535 aa.
IPR005475 Transketolase-like, pyrimidine-binding domain
method AccNumber shortName E-value location
HMMPfam PF02779 Transket_pyr 5.4e-41 214-376
HMMSmart SM00861 Transketolase, 4.1e-65 215-380
IPR005476 Transketolase, C-terminal
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPfam PF02780 Transketolase_C 4.2e-30 394-517
IPR005477 Deoxyxylulose-5-phosphate synthase
Molecular Function GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity    
Biological Process GO:0016114 terpenoid biosynthetic process    
HMMPfam PF13292 DXP_synthase_N 7.3e-45 1-178
IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
superfamily SSF52922 TK 9.8e-35 388-527
IPR015941 Transketolase-like, C-terminal
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.50.920 no description 6.3e-33 395-524
IPR020826 Transketolase binding site
PatternScan PS00802 TRANSKETOLASE_2 NA 321-337
no_ID  
Gene3D G3DSA:3.40.50.970 no description 4.6e-70 133-193
194-394
HMMPanther PTHR11624 DEHYDROGENASE 1.7e-231 1-530
HMMPanther PTHR11624:SF20 1-DEOXYXYLULOSE-5-PHOSPHATE 1.7e-231 1-530
superfamily SSF52518 Thiamin 6.5e-47 186-381
1-277
Wolf-PSORT
Lj0g3v0169239.1	chlo 6, cyto 5, pero 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0169239.1