Miyakogusa Predicted Gene
- Lj0g3v0169029.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3T5T3_LOTJA |
69.7 |
89.5 |
89.5 |
(tr|I3T5T3) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G09310.1 |
48.5 |
55.3 |
73.7 |
| Symbols: | Protein of unknown function, DUF538 | chr1:3009109-3009648 FORWARD LENGTH=179 |
| Medicago |
Medtr7g111900.1 |
61.6 |
71.1 |
86.8 |
| plant/F25P12-18 protein | HC | chr7:45982442-45981611 | 20130731 |
| Soybean |
Glyma03g38990.1 |
57.0 |
64.9 |
83.8 |
|
| LJGI |
gnl|LJGI|TC63945 |
101 |
86.5 |
86.5 |
similar to UniRef100_A7PRP2 Cluster: Chromosome chr14 scaffold_27, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_27, whole genome shotgun sequence - Vitis vinifera (Grape), partial (77%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0169029.1 |
length: 78 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Seg |
seg |
seg |
NA |
42-56 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
40 |
62 |
- Wolf-PSORT
Lj0g3v0169029.1 cyto 7, mito 2, chlo 1, extr 1, vacu 1, E.R. 1, cysk 1, cyto_mito 1, E.R._vacu 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0169029.1 |
|