Miyakogusa Predicted Gene

Lj0g3v0168929.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K4G7_SOYBN 422 73.5 78.3 (tr|I1K4G7) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT4G40060.1 245 46.6 58.5 | Symbols: ATHB16, ATHB-16, HB16 | homeobox protein 16 | chr4:18571682-18572774 REVERSE LENGTH=294
Medicago Medtr8g089895.1 412 70.6 77.5 | homeobox associated leucine zipper protein | HC | chr8:37518558-37521644 | 20130731
Soybean Glyma05g30940.1 422 73.5 78.3  
LJGI gnl|LJGI|TC63214 1130 100.0 100.0 homologue to UniRef100_Q9SP48 Cluster: Homeodomain-leucine zipper protein 56; n=1; Glycine max|Rep: Homeodomain-leucine zipper protein 56 - Glycine max (Soybean), partial (49%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0168929.1 length: 329 aa.
IPR000047 Helix-turn-helix motif
method AccNumber shortName E-value location
Molecular Function GO:0000976 transcription regulatory region sequence-specific DNA binding    
FPrintScan PR00031 HTHREPRESSR 9.5e-06 87-96
96-112
IPR001356 Homeodomain
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00046 Homeobox 2e-16 61-114
HMMSmart SM00389 Homeodomain 5.2e-18 59-120
ProfileScan PS50071 HOMEOBOX_2 17.427 56-116
IPR003106 Leucine zipper, homeobox-associated
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02183 HALZ 1e-16 116-160
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 5.7e-19 63-123
superfamily SSF46689 Homeodomain-like 3.2e-19 32-119
IPR017970 Homeobox, conserved site
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
PatternScan PS00027 HOMEOBOX_1 NA 91-114
no_ID  
Coil coil coiled-coil NA 115-164
HMMPanther PTHR24326 FAMILY 4.5e-54 60-181
HMMPanther PTHR24326:SF73 SUBFAMILY 4.5e-54 60-181
Seg seg seg NA 264-281
Wolf-PSORT
Lj0g3v0168929.1	nucl 12, mito 1, plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0168929.1