Miyakogusa Predicted Gene
- Lj0g3v0168049.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1JYX5_SOYBN |
502 |
77.1 |
85.4 |
(tr|I1JYX5) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G48880.1 |
287 |
53.9 |
74.1 |
| Symbols: TBL7 | TRICHOME BIREFRINGENCE-LIKE 7 | chr1:18081033-18082650 FORWARD LENGTH=445 |
| Medicago |
Medtr3g090120.1 |
481 |
77.0 |
86.1 |
| Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein | HC | chr3:40954110-40951713 | 20130731 |
| Soybean |
Glyma04g41980.1 |
502 |
77.1 |
85.4 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0168049.1 |
length: 304 aa. |
| IPR025846 |
PMR5 N-terminal domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF14416 |
PMR5N |
5e-22 |
119-171 |
| IPR026057 |
PC-Esterase |
| HMMPfam |
PF13839 |
PC-Esterase |
1.1e-30 |
172-301 |
| no_ID |
|
| HMMPanther |
PTHR32285 |
FAMILY |
4.1e-113 |
120-304 |
| HMMPanther |
PTHR32285:SF2 |
SUBFAMILY |
4.1e-113 |
120-304 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
6 |
28 |
| 57 |
79 |
- Wolf-PSORT
Lj0g3v0168049.1 cyto 4, extr 4, nucl 2, cyto_pero 2, E.R._plas 2, plas 1.5, E.R. 1.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0168049.1 |
|