Miyakogusa Predicted Gene

Lj0g3v0167769.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JCF2_SOYBN 689 72.1 77.8 (tr|I1JCF2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G51280.1 530 63.7 71.0 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:19037229-19038781 FORWARD LENGTH=430
Medicago Medtr8g075260.1 683 73.6 78.9 | TPR superfamily protein | HC | chr8:31818432-31815891 | 20130731
Soybean Glyma02g05170.1 689 72.1 77.8  
LJGI gnl|LJGI|FS335428 1096 99.5 99.5 homologue to UniRef100_A7QDV0 Cluster: Chromosome chr4 scaffold_83, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_83, whole genome shotgun sequence - Vitis vinifera (Grape), partial (39%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0167769.1 length: 475 aa.
IPR001440 Tetratricopeptide TPR-1
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00515 TPR_1 1.1e-08 178-209
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.6e-16 57-259
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 12.056 176-209
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 2.7e-06 176-209
ProfileScan PS50005 TPR 11.358 176-209
no_ID  
Coil coil coiled-coil NA 89-110
246-267
HMMPanther PTHR23083 TETRATRICOPEPTIDE 4.7e-110 49-322
HMMPanther PTHR23083:SF189GLL1384 PROTEIN 4.7e-110 49-322
Seg seg seg NA 14-25
327-339
434-448
superfamily SSF48452 TPR-like 1e-11 58-258
Wolf-PSORT
Lj0g3v0167769.1	chlo 10, nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0167769.1