Miyakogusa Predicted Gene

Lj0g3v0167719.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL F8TJT2_LOTJA 382 100.0 100.0 (tr|F8TJT2) ROP6 OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT2G17800.2 358 96.1 98.9 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | Arabidopsis RAC-like 1 | chr2:7740313-7741942 FORWARD LENGTH=197
Medicago Medtr8g075240.1 380 98.9 100.0 | Rho-like GTP-binding protein | HC | chr8:31801964-31806400 | 20130731
Soybean Glyma04g02530.1 365 95.6 99.4  
LJGI gnl|LJGI|TC77149 1094 100.0 100.0 homologue to UniRef100_Q35638 Cluster: Rac-like GTP-binding protein RHO1 precursor; n=1; Pisum sativum|Rep: Rac-like GTP-binding protein RHO1 precursor - Pisum sativum (Garden pea), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0167719.1 length: 184 aa.
IPR001806 Small GTPase superfamily
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
FPrintScan PR00449 RASTRNSFRMNG 9.4e-38 7-28
30-46
47-69
109-122
155-177
HMMPfam PF00071 Ras 1e-51 8-178
IPR003578 Small GTPase superfamily, Rho type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00174 Rho 4.8e-115 9-180
ProfileScan PS51420 RHO 25.095 1-177
IPR003579 Small GTPase superfamily, Rab type
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 Rab 6.8e-28 7-180
IPR005225 Small GTP-binding protein domain
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 2.1e-36 7-171
IPR020849 Small GTPase superfamily, Ras type
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006184 GTP catabolic process    
Biological Process GO:0007165 signal transduction    
Cellular Component GO:0016020 membrane    
HMMSmart SM00173 Ras 3.4e-22 4-180
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.6e-54 2-184
no_ID  
Gene3D G3DSA:3.40.50.300 no description 7.1e-62 6-183
HMMPanther PTHR24072 FAMILY 4.1e-155 1-184
HMMPanther PTHR24072:SF67 SUBFAMILY 4.1e-155 1-184
Wolf-PSORT
Lj0g3v0167719.1	cyto 6, plas 4, chlo 2, golg_plas 2, E.R._plas 2, mito_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0167719.1 Not targeted -50.827 -21.330 -1.249 75.91% -28.248