Miyakogusa Predicted Gene

Lj0g3v0167619.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL F6HVA5_VITVI 391 63.6 69.7 (tr|F6HVA5) Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0084g00170 PE=3 SV=1
TAIR_pep AT5G45140.1 352 57.8 63.6 | Symbols: NRPC2 | nuclear RNA polymerase C2 | chr5:18247416-18257713 REVERSE LENGTH=1161
Medicago Medtr8g023445.1 367 62.9 66.0 | DNA-directed RNA polymerase | LC | chr8:8458667-8488921 | 20130731
Soybean Glyma07g14980.1 385 66.0 67.9  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0167619.1 length: 287 aa.
IPR007645 RNA polymerase Rpb2, domain 3
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003899 DNA-directed RNA polymerase activity    
Biological Process GO:0006351 transcription, DNA-dependent    
HMMPfam PF04565 RNA_pol_Rpb2_3 2.1e-06 8-68
IPR007646 RNA polymerase Rpb2, domain 4
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003899 DNA-directed RNA polymerase activity    
Biological Process GO:0006351 transcription, DNA-dependent    
HMMPfam PF04566 RNA_pol_Rpb2_4 1e-09 143-190
IPR007647 RNA polymerase Rpb2, domain 5
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003899 DNA-directed RNA polymerase activity    
Biological Process GO:0006351 transcription, DNA-dependent    
HMMPfam PF04567 RNA_pol_Rpb2_5 5.1e-13 188-228
IPR015712 DNA-directed RNA polymerase, subunit 2
Molecular Function GO:0003899 DNA-directed RNA polymerase activity    
Biological Process GO:0006351 transcription, DNA-dependent    
Molecular Function GO:0032549 ribonucleoside binding    
HMMPanther PTHR20856 DNA-DIRECTED 5.4e-128 1-281
no_ID  
Gene3D G3DSA:3.90.1100.10 no description 2.4e-21 229-275
HMMPanther PTHR20856:SF8 DNA-DIRECTED 5.4e-128 1-281
superfamily SSF64484 beta 8.3e-51 1-281
Wolf-PSORT
Lj0g3v0167619.1	chlo 8, cyto 4, mito 1.5, cyto_mito 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0167619.1