| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K7KFX9_SOYBN | 580 | 72.7 | 84.1 | (tr|K7KFX9) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT5G12100.1 | 378 | 47.7 | 67.9 | | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr5:3911388-3913838 FORWARD LENGTH=816 |
| Medicago | Medtr7g103600.1 | 533 | 65.6 | 81.0 | | pentatricopeptide (PPR) repeat protein | HC | chr7:41923424-41925949 | 20130731 |
| Soybean | Glyma19g37490.1 | 541 | 68.5 | 80.7 | |
| LJGI | --No_Hits-- |
| Lj0g3v0167179.1 | length: 384 aa. | |||
| IPR002885 | Pentatricopeptide repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMPfam | PF12854 | PPR_1 | 2.1e-07 | 78-106 213-238 |
| HMMPfam | PF13041 | PPR_2 | 3e-12 | 113-162 250-296 321-366 |
| HMMPfam | PF13812 | PPR_3 | 0.22 | 14-43 |
| HMMTigr | TIGR00756 | PPR: | 2.1e-08 | 14-45 82-115 116-142 151-183 216-248 250-283 285-318 321-354 |
| ProfileScan | PS51375 | PPR | 9.756 | 9-43 79-113 44-78 114-148 149-183 213-247 248-282 283-317 318-352 353-384 |
| IPR011990 | Tetratricopeptide-like helical | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Gene3D | G3DSA:1.25.40.10 | no description | 0.0003 | 215-344 |
| no_ID | ||||
| HMMPanther | PTHR24015 | FAMILY | 1.5e-113 | 1-384 |
| superfamily | SSF81901 | HCP-like | 4.6e-06 | 215-360 |
Lj0g3v0167179.1 cyto 9, chlo 2, pero 2
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0167179.1 | Not targeted | -17.856 | -4.330 | -0.640 | 10.28% | -12.886 |